Hi Shamik, We don't have a really easy way to get what you are looking for. It looks like the Genome Reference Center (GRC) is working to try to make this kind of data more accessible:
"The original model for representing the genome assemblies was to use a single, preferred tiling path to produce a single consensus representaton of the genome. Subsequent analysis has shown that for most mammalian genomes a single tiling path is insufficient to represent a genome in regions with complex allelic diversity. The GRC is now working to create assemblies that better represent this diversity and provide more robust substrates for genome analysis." On the current human genome assembly (hg19) there are nine haplotype chromosomes that might be of interest to you. More information about these haplotypes can be found on the gateway page for the hg19 assembly (http://genome.ucsc.edu/cgi-bin/hgGateway). If you have further questions, please contact the mailing list: [email protected]. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ---------- Forwarded message ---------- From: Polley, Shamik (Dr.) <[email protected]> Date: Thu, Jun 30, 2011 at 9:29 AM Subject: [Genome] Genomic sequence of different allele To: "[email protected]" <[email protected]> Hi, I want to collect genomic sequences of different alleles of same gene. Is there any option so that I can get the sequences? Regards, Shamik _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
