Hi Emanuele, The files you see labeled "3.2.7" or "327" are the result of a more recent RepeatMasker version run on the same genome build (hg18). You can get a description of each track by going to the main Genome Browser page (http://genome.ucsc.edu/cgi-bin/hgTracks) on the hg18 assembly and clicking on the blue track name for each track. The tracks are in the "Variation and Repeats" group, the track names are "RepeatMasker" and "RepMask 3.2.7".
If you have further questions, please feel free to contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 07/10/11 06:40, Emanuele F. Osimo wrote: > Hello, > I need to import genomide output of RepeatMasker on human hg18. > I found many possible files to import in my db: > - in http://hgdownload.cse.ucsc.edu/goldenPath/hg18/bigZips/ I > found chromOut.zip and chromOut.RM3.2.7.zip > - in http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/ I found many > files divided by chromosome (chr1_random_rmsk.sql, chr1_random_rmsk.txt.gz, > chr1_random_rmskRM327.sql, chr1_random_rmskRM327.txt.gz, chr1_rmsk.sql, > chr1_rmsk.txt.gz, chr1_rmskRM327.sql, chr1_rmskRM327.txt.gz) > > Which are the most recent (latest hg18 build, latest RM version)? > > Thanks > Emanuele > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
