Hi Bogdan, I think the easiest thing would download the mmBlastTab file from the rn4 assembly and/or the rnBlastTab file from the mm9 assembly (depending on which you want to be your reference/query):
From our downloads server (http://hgdownload.cse.ucsc.edu), click on the organism of interest, find the appropriate assembly, then click on the Annotation database link. From here, you can download the tables. The tables are called *BlastTab: On mm9 you'll want rnBlastTab On rn4 you'll want mmBlastTab Please contact the mail list ([email protected]) again if you have any further questions. Katrina Learned UCSC Genome Bioinformatics Group Bogdan Tanasa wrote, On 07/22/11 15:36: > Dear all, > > please could you suggest a quick way to retrieve a list of homologous genes > between mouse and rat ? > > thanks, > > bogdan > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
