Hi Hunter, The default number of items to display for bigBed tracks is 250. This previously answered question may be useful for you: https://lists.soe.ucsc.edu/pipermail/genome/2010-August/023289.html
I hope this helps. Please contact us again at [email protected] if you have any further questions. --- Luvina Guruvadoo UCSC Genome Bioinformatics Group On 8/1/2011 8:21 PM, Hunter Richards wrote: > Hi, > > I'm using the bedToBigBed utility to view some really large bed files. > In some regions where I know there are a lot of tags present the browser > doesn't display all the tags like it does in regions with less tag > density, rather it just displays a single black bar. I presume this is > just because there are too many tags to display. If that is the case how > many tags have to pile up before they are no longer displayed and the > black bar is put in its place? Note, I do have the track display set to > either squish or full. I would like to be able to display the tag > abundance for illustrative effects if possible. > > Thanks, > -hunter > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
