Hi, Please correct me if I am wrong. I have some insertion/deletion bed output from TopHat, and uploading these files to UCSC Genome Browser was fine. Then I tried to convert to BAM format (using bedToBam in BEDTools package) and put the link on the browser. I got error:
baseColorDrawSetup: -: mRNA size (0) != psl qSize (2) Does that mean BAM does not support 0-size blocks? If not, then please explain to me why I had the above error. Thanks D. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
