Hi, I would like to know about the Chip seq data in the regulation track of Encode data in Hg 18 version .
I am interested in finding the TFBS from the CHIP seq data,But unfortunately,I have some problems with the approach to be followed. 1.) I would like to know,How do we get the the regions of more that 100bp for the TFBS,while we look for the TFBS from the Chip seq data. 2.) I would like to know about the cell line or the data,which I can use for my experiments,But looking at the vast data of Chip seq,I am not able to decide,The gene of my intrest expresses in Neuronal cells,I mean Nervous system. So, How do I decide about the cell line data or tissue data to be used for,from The UCSC browser. Could you please help witht the proper explanation,I have read the whole list of the Cell lines,etc,But I am confused. -- *"with best regards" Rajendra Kumar Chauhan **Department of Genetics University Medical Center Groningen Univerity of Groningen (RUG) The Netherlands * *Mobile:- +31-686185912* _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
