Hi Dear list, i enounter following error when i try to compile the kent source:
knetUdc.c:13:8: error: redefinition of ‘struct knetFile_s’ /home/dli/samtools-0.1.11/knetfile.h:24:16: note: originally defined here knetUdc.c: In function ‘kuOpen’: knetUdc.c:29:3: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c:30:57: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c: In function ‘kuRead’: knetUdc.c:44:59: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c:45:25: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c: In function ‘kuSeek’: knetUdc.c:57:29: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c:60:54: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c:61:11: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c: In function ‘kuTell’: knetUdc.c:68:48: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c:69:18: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c: In function ‘kuClose’: knetUdc.c:75:49: error: ‘knetFile’ has no member named ‘udcf’ knetUdc.c:76:18: error: ‘knetFile’ has no member named ‘udcf’ cc1: warnings being treated as errors knetUdc.c: In function ‘knetUdcInstall’: knetUdc.c:84:1: error: implicit declaration of function ‘knet_init_alt’ knetUdc.c: In function ‘kuTell’: knetUdc.c:70:1: error: control reaches end of non-void function knetUdc.c: In function ‘kuRead’: knetUdc.c:46:1: error: control reaches end of non-void function make: *** [knetUdc.o] Error 1 i also tried different version of samtools and tabix, but still encounter this error. How to solve this? Thx in advance:) -- Daofeng Li Postdoc Research Associate Department of Genetics Washington University in St.Louis School of Medicine 314-556-2832 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
