Hi Norman, The human assembly (hg19) snp132 track includes 1000 Genomes pilot project variant calls. The 1000 Genomes SNPs submitted to dbSNP for build 134 are available in Variant Call Format (VCF;http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41<http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41>) here: ftp://ftp-trace.ncbi.nlm.nih.gov/1000genomes/ftp/technical/working/20110621_vqsr_sites_v2b/
Also, please see ftp://ftp-trace.ncbi.nlm.nih.gov/1000genomes/ftp/README.ftp_structure for more information about available downloads from 1000 Genomes. I hope this information helps. Feel free to contact us again at [email protected] if you have any further questions. --- Luvina Guruvadoo UCSC Genome Bioinformatics Group On 10/11/2011 9:11 AM, Norman Goodacre wrote: > Good afternoon, > > > I am studying SNPs for my thesis research at Georgetown Univerisity > (PIR), and I was interested to know whether variants discovered in the > recent 1000 Genomes Consortium project have made it into UCSC Genome browser > tables, specifically SNPs, yet. I would be most grateful for your > assistance. > > Regards, > > > Norman Godoacre > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
