Dear Mary, I have a question regarding availability of data in UCSC Genome Browser. Is their any downloadable file which has information about genes and its transcription start site with genome address?
Thanks, Prasad On Wed, Jun 1, 2011 at 9:00 PM, Mary Goldman <[email protected]> wrote: > Hi Prasad, > > You can always view the track details page for more information: > http://genome.ucsc.edu/cgi-**bin/hgTrackUi?db=hg18&g=**acembly<http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg18&g=acembly> > . > > I hope this information is helpful. Please feel free to contact the mail > list again if you require further assistance. > > Best, > Mary > ------------------ > Mary Goldman > UCSC Bioinformatics Group > > > On 5/31/11 3:06 PM, Lakshmi Vara Prasad Koneru wrote: > >> Hello, >> >> I have a question regarding hg18 annotation file (acembly.txt.gz). The >> hg18 >> annotation file contain gene names with alternative splicing product >> names.For example, if I am looking for notiri gene, the annotation file >> contains notiri.bApr07,notiri.aApr07-**unspliced. Out of these two gene >> product names, which one should I consider as notiri gene? Can you please >> provide a web link which describes acembly.txt annotation file? >> >> _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
