Hi Brent, You can display the negative data in another color using the altColor attribute in the track line (e.g. altColor=0,100,200). For more information about bedgraph custom tracks, see http://genome.ucsc.edu/goldenPath/help/bedgraph.html.
Please contact the mail list ([email protected]) again if you have any further questions. Katrina Learned UCSC Genome Bioinformatics Group On 10/28/11 2:22 PM, Brent Pedersen wrote: > Hi, I have some data like this: > > track type=bedGraph graphType=bar viewLimits=-5:5 yLineMark=0 > yLineOnOff=on smoothingWindow=off color=255,0,0 autoScale=off > visibility=full alwaysZero=on maxHeightPixels=128:64:32 > chr1 795231 795282 0.0430635861558 > chr1 795273 795324 2.2134615195 > chr1 795309 795360 0.0834407806989 > chr1 795375 795426 1.0025699262 > > chr1 795231 795282 -0.638461028731 > chr1 795273 795324 -1.02383349987 > chr1 795309 795360 -2.30962669308 > chr1 795375 795426 -2.18862610295 > > I'd like to be able to display the latter data in a different color. > Is there a way to do this with bedgraph? > If I add 'track color=0,0,255' in the blank line, it doesn't render > the positive data at the top. > thanks for any ideas. > -Brent > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
