It is not clear at all how one would create bigbed for all human chromosomes.
For a given track, do we put the results of all chromosomes in one bigbed or do we make a bigbed for each chromosomes? Minou Bina Purdue University ----- Original Message ----- From: "Luvina Guruvadoo" <[email protected]> To: "Minou Bina" <[email protected]> Cc: [email protected] Sent: Monday, November 7, 2011 4:45:09 PM Subject: Re: [Genome] bed and bigbed files Hi Minou, If you have a large file, you may want to consider using the bigBed data format. Please see the following page for more information on bigBed: http://genome.ucsc.edu/goldenPath/help/bigBed.html If you would like to share your bigBed data track with others, see this page for details on how to create a URL: http://genome.ucsc.edu/goldenPath/help/customTrack.html#SHARE Please contact us again at [email protected] if you have any further questions. --- Luvina Guruvadoo UCSC Genome Bioinformatics Group On 11/1/2011 1:04 PM, Minou Bina wrote: > Hi > > To create a custom track for the entire human genome > > It is not clear whether or not results for all chromosomes should be in a > single .bed file > > If the track for all chromosomes is put in a single .bed file, could this > .bed file be converted to bigbed so that the track could be accessed by > other labs? > > Minou Bina > Purdue University > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
