Sir, Below are the step I am using…
******************************* Clicking on genomes Selecting Human Entering gene symbol in ‘gene’ textfield. Click submit Clicking on first cartoon of gene (UCSC gene based on RefSeq, UniProt, GenBank, CCDS and comparative genomics) In ‘sequence and links to tools & database’ , click on ‘Genomic sequence (chr…………) Entered 700 in ‘Promoter/upstream’ and 300 in ‘Downstream’. Rest deselect. Click submit. Got seq in FASTA format. ******************************* However, the downstream 300bp seem to be incorrect in all the cases. I would like to know how to extract 300 bases downstream of TSS using UCSC genome. Regards, Nikita Pednekar. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
