Hello Dipti, You can find a description of all the different ENCODE cell lines we display here:
http://genome.ucsc.edu/ENCODE/cellTypes.html The "Open Chromatin by FAIRE from ENCODE/OpenChrom(UNC Chapel Hill)" ENCODE track may be of specific interest to you. You can read more about it on the track description page here: http://genome.ucsc.edu/cgi-bin/hgTrackUi?c=chr21&g=wgEncodeOpenChromFaire More generally you can obtain sequence for any region in the browser by clicking on the "DNA" link in the top blue bar above the main browser display. Once you have the sequence of the region you'd like to amplify, you may find our PCR tool useful for designing primers: http://genome.ucsc.edu/cgi-bin/hgPcr Hopefully this information was helpful and answers your question. If you have further questions or require clarification feel free to contact the mailing list at [email protected]. Regards, Pauline Fujita UCSC Genome Bioinformatics Group http://genome.ucsc.edu ----- Original Message ----- From: "Dipti Thakkar" <[email protected]> To: [email protected] Sent: Wednesday, November 9, 2011 6:26:58 AM Subject: [Genome] qery Hi, I have a very basic difficulty but I am not a bioinformatician and hence am struggling with it . I need to get the sequence of a pair pear in the HUMAN fibroblast cell line (I guess it is the IMR90) for PCR experiments. I dont know who to get the sequence forthe FAIRE PEAK. Can you please help me out how to go about this Regards Dipti _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
