dear all, I do have question regarding the BAM alignment files specified above. I converted the BAM file into the SAM file using SAM tools, however I am not clear which field holds the orientation of the match (read) with regards to the genome. Would the 16 and 0 in column 2 stand for reverse and direct orientation respectively??
Thanks a lot in advance, Carsten _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
