Hello everyone,

I have a bed file containing some genomic features with coordinates

I would like to extract automatically two information concerning the UCSC 
conservation (hg18 vertebrate) :

Number of Conserved bases (coverage basically)
Number of conserved blocks (corresponding to these bases)
I remember there is a ucsc tool that do that but I lost its name, any idea ?

Thanks

Rad


Radhouane Aniba
Bioinformatics Postdoctoral Research Scientist
Institute for Advanced Computer Studies
Center for Bioinformatics and Computational Biology (CBCB)
University of Maryland, College Park
MD 20742

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