Few more questions about this topic... The aforementioned files (bigBed, BigWig and bam) are intended to be used just internally by the UCSC people or external users like me can do something with them? If the last is true, where can I find information about the usability? Thanks, Diego
-----Original Message----- From: Vanessa Kirkup Swing [mailto:[email protected]] Sent: Thursday, September 15, 2011 2:02 PM To: Diego F. Pereira Cc: [email protected] Subject: Re: [Genome] Hg19 tables Hi Diego, bigBed is also another file type that we store as a file in a table. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group On Thu, Sep 15, 2011 at 11:44 AM, Diego F. Pereira <[email protected]> wrote: > Thank you very much Vanessa. > Best, > Diego > > -----Original Message----- > From: Vanessa Kirkup Swing [mailto:[email protected]] > Sent: Thursday, September 15, 2011 1:28 PM > To: Diego F. Pereira > Cc: [email protected] > Subject: Re: [Genome] Hg19 tables > > Hi Diego, > > The tables list a path to a file name. We have 2 different types of > files types that we store as files in tables which are bigWig and bam. > To find more information on those file types please take a look at > this > page: > > http://genome.ucsc.edu/FAQ/FAQformat.html > > I hope this information is useful. If you have further questions, > please contact the mailing list: [email protected]. > > Vanessa Kirkup Swing > UCSC Genome Bioinformatics Group > > > ---------- Forwarded message ---------- > From: Diego F. Pereira <[email protected]> > Date: Thu, Sep 15, 2011 at 9:23 AM > Subject: [Genome] Hg19 tables > To: [email protected] > > > Good morning, > > By reviewing the Hg19 database, I found several wgEncode tables that > have just 2 fields (i.e. fileName and Field0). > > I would like to ask you what type of information they contain or where > I can find some info about them. > > > > Best Regards, > > Diego > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
