Hi Devasta, We have not tested on 32-bit machines in quite some time, so we can't say for sure if that might be an issue.
As far as the segmentation fault error - you might try debugging with JKSQL_TRACE=on in the URL or with 'strace -f', which may give you an idea of where it's stopping. See this previous mailing list question for some additional info: https://lists.soe.ucsc.edu/pipermail/genome-mirror/2011-September/002831.html Also see this wiki entry: http://genomewiki.ucsc.edu/index.php/Browser_Installation#If_it_doesn.27t_work... The database setup can lead to segmentation faults if tables are missing or hgcentral is not correct. Please let us know if you have any additional questions: [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 12/3/11 9:11 AM, Devasta Palle wrote: > Hi all, > > I am on a 32-bit debian 6 machine. > I compiled the CGIs of the jksrc and, after a minimal set up of mysql > database and hg.conf, I tried to run some of the CGI binaries from the > command line. > hgTables gives me a Segmentation Fault error after printing the following > line: > > Set-Cookie: hguid=106; path=/; domain=; expires=Thu, 31-Dec-2037 23:59:59 > GMT > > Besides, the output (HTML) of hgTracks is much less of that of the webpage > at genome.ucsc.edu/cgi-bin/hgTracks. > > My goal is to set up a genome browser mirror (for few species) with at > least hgTracks and hgTables functionality. > > Has anyone had similar issues and solved them? > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
