Hi Mauro, We are in the early planning stages of such a tool -- no timeframe for implementation.
Meanwhile, Ensembl's Variant Effect Predictor (http://uswest.ensembl.org/info/docs/variation/vep/index.html) can help, and NCBI just rolled out its Variant Reporter Tool (http://www.ncbi.nlm.nih.gov/variation/tools/reporter) for human assemblies NCBI36 (hg18) and GRCh37 (hg19). Please let us know if you have any additional questions: [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 12/12/11 3:42 PM, Mauro Castellarin wrote: > Hello, > > I have a list of genomic positions for putative mutations that I would like > to convert into mutant mRNA and peptide sequences. Could you recommend an > automated way to do this? > > Thank you, > > Mauro Castellarin > PhD Candidate > BC Cancer Research Centre > 675 West 10th Avenue > Vancouver, BC V5Z 1L3 > (604) 675-8000x7501 > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
