Hi All, I have a list of genes which are common in few species. I want to extract genomic sequence for all the genes in these organisms and do multiple alignment to see conserved regions for same gene across the genome. Is there anyway to do this is one go?
I know I can extract DNA seq via table browser and uploading list of genes in identifiers names/accessions. However there is a problem with this. I have a gene list in format like 'A8MVU8' but whenever I upload this list and choose refgene or UCSC genes output doesn't give same gene name. Output format shows gene name is ucsc or refgene format. This is causing some confusion. I am not sure whether gene seqs are in same order as genelist uploaded in the table browser. Is there any better way of doing this? KIF18A Regards Hersh _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
