Thank you so much! On Fri, Feb 10, 2012 at 11:23 AM, Brooke Rhead <[email protected]> wrote:
> Hello Morita, > > We don't host any gene fusion annotations in the Genome Browser, but one > of our engineers pointed out that COSMIC (http://www.sanger.ac.uk/** > genetics/CGP/cosmic/News<http://www.sanger.ac.uk/genetics/CGP/cosmic/News>) > has curated gene fusions. > > I hope this helps! > > -- > Brooke Rhead > UCSC Genome Bioinformatics Group > > > > On 2/9/12 6:21 PM, Morita Pagan wrote: > >> Hello, >> I am desperately trying to find a way to obtain the genomic location of >> some very common gene rearrangements reported in cancer. I will be looking >> at NGS data and want to see for example if RET/PTC3, RET/PTC1, PAX8/PPARG >> rearrangements are in my data. I have scoured the internet looking for a >> specialized database to no avail. There are hundreds of reports listing >> these common mutations, but so far they all fail to indicate exactly where >> to look for the fusion events. can you please help? >> Thank you! >> Morita >> ______________________________**_________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/**mailman/listinfo/genome<https://lists.soe.ucsc.edu/mailman/listinfo/genome> >> > -- ~morita 415-517-9866 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
