Dear all,
I'm having some difficulties in classifying the following tables
according to their cell type.
I divided them into 2 groups:
Group 1 are tables that can belong to more than 1 cell type. Can you
please tell me to which cell type they refer to?
For Group 2 tables I would like to ask you to confirm that the
"possible cell line" is actually the cell type those tables refer to.
In case the actual cell type is different from those I labeled as
"Possible Cell Lines", can you please let me know what is the actual
cell type?
Thanks in advance,
Diego
Group 1
Term "Hpae"
Tables
wgEncodeHaibMethylRrbsHpaeUwSitesRep1
wgEncodeHaibMethylRrbsHpaeUwSitesRep2
wgEncodeHaibMethylRrbsHpaeUwstamgrowprotSitesRep1
wgEncodeHaibMethylRrbsHpaeUwstamgrowprotSitesRep2
wgEncodeHaibMethyl450HpaeSitesRep1
Possible Cell Lines
HPAEC
HPAEpiC
Term "Panis"
Tables
wgEncodeOpenChromDnasePanisdPk
Possible Cell Lines
PanIsletD
PanIslets
Term "Astrocy"
Tables
wgEncodeOpenChromFaireAstrocyPk
wgEncodeDukeAffyExonAstrocySimpleSignalRep1
wgEncodeDukeAffyExonAstrocySimpleSignalRep2
Possible Cell Lines
HA-h
HA-sp
HAc
NH-A
U87
Group 2
Term "Keratinocyte"
Tables
wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongnonpolya
wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongpolya
wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongnonpolya
wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongpolya
wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongnonpolya
wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongpolya
wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongnonpolya
wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongpolya
Possible Cell Lines
NHEK
Term "H7es"
Tables
wgEncodeUwDgfH7esPkV2
wgEncodeUwDnaseH7esPkRep1V2
wgEncodeUwDnaseH7esPkRep2
wgEncodeUwHistoneH7esH3k27me3StdPkRep1
wgEncodeUwHistoneH7esH3k27me3StdPkRep2
wgEncodeUwHistoneH7esH3k36me3StdPkRep1
wgEncodeUwHistoneH7esH3k36me3StdPkRep2
wgEncodeUwHistoneH7esH3k4me3StdPkRep1
wgEncodeUwHistoneH7esH3k4me3StdPkRep2
wgEncodeUwDgfH7esHotspots
wgEncodeUwDnaseH7esHotspotsRep1
wgEncodeUwDnaseH7esHotspotsRep2
wgEncodeUwHistoneH7esH3k27me3StdHotspotsRep1
wgEncodeUwHistoneH7esH3k27me3StdHotspotsRep2
wgEncodeUwHistoneH7esH3k36me3StdHotspotsRep1
wgEncodeUwHistoneH7esH3k36me3StdHotspotsRep2
wgEncodeUwHistoneH7esH3k4me3StdHotspotsRep1
wgEncodeUwHistoneH7esH3k4me3StdHotspotsRep2
wgEncodeUwAffyExonArrayH7esSimpleSignalRep1
wgEncodeUwAffyExonArrayH7esSimpleSignalRep2
Possible Cell Lines
H7-hESC
Term "Urotsa"
Tables
wgEncodeOpenChromDnaseUrotsaPk
wgEncodeOpenChromDnaseUrotsaUt189Pk
wgEncodeOpenChromFaireUrotsaPk
wgEncodeOpenChromFaireUrotsaUt189Pk
wgEncodeDukeAffyExonUrotsaSimpleSignalRep1
wgEncodeDukeAffyExonUrotsaUt189SimpleSignalRep1
Possible Cell Lines
Urothelia
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