Good Afternoon Diego:
You may find it more convenient to work with these tables
from command line operations at your site. You can use
the public MySQL server with the downloaded .wib files
for ordinary wiggle tracks:
http://genomewiki.ucsc.edu/index.php/Using_hgWiggle_without_a_database
And any track with a bigWig type can be used with its URL
to the hgdownload server.
With the command line commands you can format the wiggle data
in any of the available formats.
--Hiram
----- Original Message -----
From: "Diego Pereira" <[email protected]>
To: [email protected]
Sent: Monday, March 12, 2012 2:25:17 AM
Subject: [Genome] Format request
Good morning,
I've been working with several tables at the table browser, and I've
found really difficult and time consuming to automatize the
organization of my results due the format they are displayed.
This happens mainly with the results of wigData.
However, by using the Kent's source I found that using the
bigWigToBedGraph utility most of the results (at least those I have
tried) are displayed uniformly with a format consistent with those
retrieved from primary tables.
I believe it can be great that the default way for displaying the
results at the table browser were in this format.
Of course I don't know how difficult it can be to do this, or if there
are some reasons that not allow this shift in formatting.
In that case please accept my apologies.
Anyway, is just an idea that will probably help many people in
spending less time in the organization of their results .
All the best,
Diego
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