Hello, If I download ETV6 from knownGene table and download the custom track for 5' UTR I was wondering what the data is sorted by. At first it appeared to be by the 5'UTR Exon start but with closer inspection this is not the case.
Here is a snippet from my results: chr12 | 11187380 | 11187484 | uc001qzb.4_utr5_8_0_chr12_11187381_r | 0 | - chr12 | 11199618 | 11199787 | uc001qzb.4_utr5_9_0_chr12_11199619_r | 0 | - chr12 | 11324020 | 11324224 | uc001qzb.4_utr5_10_0_chr12_11324021_r | 0 | - chr12 | 10998447 | 10998549 | uc021qve.1_utr5_0_0_chr12_10998448_r | 0 | - chr12 | 10999643 | 10999966 | uc021qve.1_utr5_1_0_chr12_10999644_r | 0 | - chr12 | 11000970 | 11001006 | uc021qve.1_utr5_2_0_chr12_11000971_r | 0 | - I do not understand the ordering of the results, any information will be greatly appreciated. Thanks, Dan _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
