Hi Bill, This previously answered question might help: https://lists.soe.ucsc.edu/pipermail/genome/2011-March/025290.html
Let us know if you are still experiencing problems: [email protected] --- Luvina Guruvadoo UCSC Genome Bioinformatics Group On 4/5/2012 4:04 PM, Bill Biggs wrote: > Hi Team UCSC Genome Center, > > In an effort to translate hg19 annotations to hg18, GCRh37, and GCRh36 > genomes I recently downloaded the liftOver executable from the UCSC GC ftp > site. > Already have the chain files. > > The downloaded tool does not appear to be an executable (-rw-r--r--)… > Then used sudo chmod to add executable permissions (-rwxr-xr-x)… > Continue to get liftOver: command not found. > > Found this for both Linux and Mac executables. > > Sorry for what must be a mundane question. > > Thanks, > bill biggs > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
