Hi Henry, The gnfAtlas2 table contains these values which you can retrieve from the Table Browser. Click on "Tables" on the top blue navigation bar (http://genome.ucsc.edu/cgi-bin/hgTables?), and make the following selections:
clade: Mammal genome: Human assembly: hg19 group: Genes and Gene Prediction Tracks track: UCSC Genes table: knownToGnfAtlas2 identifiers: click on 'paste list' and type in DLEU2; click submit output format: selected fields from primary and related tables Click on 'get output'. On the following page, select name and value from hg19.knownToGnfAtlas2. Scroll down to the Linked Tables section and select gnfAtlas2, then scroll down to click on 'Allow Selection From Checked Tables'. Finally, select expIds, expScores (and any other fields) from hg19.gnfAtlas2 and click 'get output'. This previously answered question provides a list of experiment Ids and their values: https://lists.soe.ucsc.edu/pipermail/genome/2011-May/025956.html I hope this helps. Please contact us again at [email protected] if you have any further questions. --- Luvina Guruvadoo UCSC Genome Bioinformatics Group On 4/24/2012 2:46 AM, hwh henry [11901796r] wrote: > Dear Sir/Madam, > > I am interested in the section of Microarray Expression Data in your > database. The heatmap is shown under the section of Microarray Expression > Data when I clicking on a gene at the track of the UCSC Genes in the Genome > Browser. But how can I retrieve both the ratio and absolute value for all > these tissues and cell lines? Would you use the DLEU2 gene as an example to > show me how to retrieve those data? > > Cheers, > Henry > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
