Hi Alain, There are other tracks that do contain CTCF Transcription Factors, but they aren't conservation tracks. These other tracks can be found using our track search feature which you can get to from the gateway page ( http://genome.ucsc.edu/cgi-bin/hgGateway), selecting the assembly of interest and then clicking on "track search". Then type "CTCF TFBS" and click "search". This will give you a list of CTCF TFBS tracks that may be of interest to you.
I hope you find this information helpful. If you have further questions, please email the list: [email protected]. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ---------- Forwarded message ---------- From: Alain Pacis <[email protected]> Date: Tue, May 22, 2012 at 2:18 PM Subject: [Genome] CTCF TFBS To: [email protected] Hi, I am looking for conserved binding sites of CTCF. I usually use the conserved TFBS track in UCSC for other transcription factors such as NFkB by using the linux grep command. However I can't find binding sites for CTCF. Thank you. -- Alain Pacis _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
