Ok Brooke As always thank you. Regards, Diego 2012/6/1 Brooke Rhead <[email protected]>
> Hi Diego, > > I am not able to help interpret the values in the track. I suggest > emailing the contact person for the labs that contributed the data track: > Anshul Kundaje ([email protected]). > > > -- > Brooke Rhead > UCSC Genome Bioinformatics Group > > > On 6/1/12 3:59 PM, Diego Pereira wrote: > >> Thank you Brooke. >> But as you can notice I already read the documentation, and I still >> don't know how can I interpret those values. >> Do you know how to interpret them? >> >> 2012/6/1 Brooke Rhead <[email protected] <mailto:[email protected]>> >> >> >> Hi Diego, >> >> Further down on that page >> (http://genome.ucsc.edu/cgi-__**bin/hgTrackUi?db=hg19&g=__** >> wgEncodeSydhNsome<http://genome.ucsc.edu/cgi-__bin/hgTrackUi?db=hg19&g=__wgEncodeSydhNsome> >> <http://genome.ucsc.edu/cgi-**bin/hgTrackUi?db=hg19&g=** >> wgEncodeSydhNsome<http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhNsome> >> >), >> >> in the "Methods" section, there is more information about the signal >> values. See the sentence that starts with "Nucleosome density >> signal maps (bedgraph and bigwig files) were generated by first >> shifting reads . . ." >> >> There is also a contact person listed in the "Credits" section who >> could likely provide more details. >> >> -- >> Brooke Rhead >> UCSC Genome Bioinformatics Group >> >> >> >> On 5/31/12 11:00 PM, Diego Pereira wrote: >> >> Dear all, >> >> Can somebody explain what does the signal values in the >> wgEncodeSydhNsome >> track mean? >> >> The documentation just says: >> >> [QUOTE] >> *Signal*Density graph (wiggle) of signal enrichment based on >> processed >> >> data. Signals displayed in this track are the results of pooled >> replicates. >> [/QUOTE] >> >> Probably I'm missing something... >> >> Thanks in advance, >> >> Diego >> ______________________________**___________________ >> Genome maillist - [email protected] <mailto:[email protected] >> > >> >> https://lists.soe.ucsc.edu/__**mailman/listinfo/genome<https://lists.soe.ucsc.edu/__mailman/listinfo/genome> >> >> <https://lists.soe.ucsc.edu/**mailman/listinfo/genome<https://lists.soe.ucsc.edu/mailman/listinfo/genome> >> > >> >> >> _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
