Hi Yuval, Please see this other mailing list thread, also from Friday: https://lists.soe.ucsc.edu/pipermail/genome/2012-June/029391.html
Please let us know if you have any additional questions: [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 6/3/12 6:03 AM, Yuval Tabach wrote: > Hello, > > > > I have a genomic coordinates (genome version WS230) of briggase RNA seq > data. I would like to know what are the equivalent positions in C.elegans > (genome version WS230) base on genomic alignment - converts genome > coordinates. I taught of using LiftOver but the newest genomic versions that > are available for C.briggsae and c.elegans are from 2007. > > > > What is the best options I have to converts genome coordinates from briggase > to elegans (using genome version WS230) > > > > Thanks a lot > > Yuval > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
