Dear All I am a novice to the field of genome analysis. I need to know how to calculate the frequency of different families of repeats in specific genomic regions. I downloaded the relevant data from the UCSC genome browser (repeat masker data/repeat family) where I can only get the start and end postion of every repeat/chromosome but I don't know how I can calculate the frequency ?? any ideas or suggestions would be much appreciated.
Thanks a lot Alyaa Mahmoud -- Alyaa Mahmoud "Love all, trust a few, do wrong to none"- Shakespeare _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
