Hi Pekka, The data in our tables are zero-based, half-open coordinates. See explanations here:
http://genome.ucsc.edu/FAQ/FAQtracks.html#tracks1 and http://genomewiki.ucsc.edu/index.php/Coordinate_Transforms If you have further questions, please contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 7/6/12 6:51 AM, Pekka Nieminen wrote: > Hi > > Why is it that in the Genome Browser (human GRCh37_hg19) the start > positions for genes and ORFs (txStart and cdsStart) are +1 as compared > to the data in tables (created by Tables option, UCSC genes, Genes and > gene prediction tracks)? I think that the latter are not correct. > > Pekka Nieminen > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
