Hi Rob, The Zv7 build (our danRer5) is in the process of getting archived (see the announcement here: https://lists.soe.ucsc.edu/pipermail/genome-announce/2012-June/000253.html).
However, it will still be available on our preview machine for a bit longer: http://genome-preview.ucsc.edu/cgi-bin/hgGateway?clade=vertebrate&org=Zebrafish&db=danRer5 After Zv7 disappears from there, it will still be possible to user our liftOver tool (http://genome.ucsc.edu/cgi-bin/hgLiftOver) to convert the coordinates of the data from the publication to a later zebrafish assembly version. If you have further questions, or if you need help converting data coordinates, please contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 7/10/12 2:31 PM, Cornell, Robert A wrote: > Dear UCSC browser folks, > > Is there a way to access the Zv7 build of the zebrafish genome? We > would like to visualize recently published chipseq data that is based > on the zv7 build. > > Developmental > Biology<http://www.sciencedirect.com/science/journal/00121606> > > Volume 357, Issue > 2<http://www.sciencedirect.com/science/journal/00121606/357/2>, 15 > September 2011, Pages 450–462 > > Thanks Rob -- > > Robert A. Cornell, Associate Professor Department of Anatomy and Cell > Biology 1-400D Bowen Science Building Carver College of Medicine, > University of Iowa, Iowa City, Iowa 52242 Phone (319) 335-8908, FAX > (319) 335-7198 [email protected] > > _______________________________________________ Genome maillist - > [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
