Hello everyone,

I played a lot with conservation tracks on UCSC genome browser and I know that 
we can select species and deselect some others.
Now this conservation if I understood well, are pre-calculated for let's say 44 
species. If we select only human and mouse for display, is the plot shown in 
the browser corresponding to phastCons score ONLY for Human and Mouse or are 
these score for the 44 species and only Human and Mouse are shown.

If it is the case, I have some regions in Human that I want to map to 
corresponding region in Mouse to extract phastCons scores, is there a way of 
doing it using the browser or UCSC Tables ? Any MySQL query is welcome as well.

Regards,

Rad
 
Radhouane Aniba
Bioinformatics Postdoctoral Research Scientist
Institute for Advanced Computer Studies
Center for Bioinformatics and Computational Biology (CBCB)
University of Maryland, College Park
MD 20742

_______________________________________________
Genome maillist  -  [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome

Reply via email to