It looks like it is just the dev-python/Babel ebuild as far as I can see.
I used to be happy on a case insensitive file system myself but
I have the above as a dependency of something else and this is fun:

fbissey@Mirage ~/Gentoo $ emerge -puDNv dev-python/babel

These are the packages that would be merged, in order:

Calculating dependencies... done!

emerge: there are no ebuilds to satisfy "dev-python/babel".

emerge: searching for similar names...
emerge: Maybe you meant any of these: dev-python/Babel, dev-python/babelfish, 
dev-python/blz?
fbissey@Mirage ~/Gentoo $ emerge -puDNv dev-python/Babel

These are the packages that would be merged, in order:

Calculating dependencies... done!

emerge: there are no ebuilds to satisfy "dev-python/Babel".

emerge: searching for similar names...
emerge: Maybe you meant any of these: dev-python/babelfish, dev-python/blz, 
dev-python/tablib?

There is a loose policy, as far as I remember to avoid capital in
package names as much as possible (stuff like dev-lang/R being case 
where you usually want capital). I am not entirely clear what it is in
Babel that breaks things though, there must be something more than
capitalisation.

François

> On 19/05/2015, at 12:03, Gibson, John <[email protected]> wrote:
> 
> On May 18, 2015, at 19:07, yegle <[email protected]> wrote:
>> 
>> On Mon, May 18, 2015 at 2:13 AM, Konstantin Tokarev <[email protected]> 
>> wrote:
>>> You should create case-sensitive partition and move your prefix there.
>> 
>> If this is a requirement of using Gentoo Prefix then yes I should
>> start with a case-sensitive partition. But looks like this is not the
>> case, at least I cannot find it in the bootstrap guide etc.
>> 
>> I've been using Gentoo Prefix on a case-insensitive FS (blame Apple
>> for the default) for 5 years without a problem, and the rsync problem
>> appeared in recent weeks.
>> 
>> So I'm looking for anyone who can confirm that there's a problem
>> syncing and the problem tie to a case-insensitive FS. Then, either
>> declare that Gentoo Prefix require a case-sensitive FS and everyone
>> should migrate their existing prefix, or fix the problem by
>> remove/rename the offending file in portage tree.
>> 
>> -- 
>> yegle
>> http://about.me/yegle
>> 
> 
> I've been using Prefix since at least 2008 and it does require a 
> case-sensitive file system, however as Fabian said way back then:
>> I'm running on case-insensitive filesystem too, and the problems
>> currently are very very very limited.  So just go for it and forget
>> about it, until you start to hit weird errors ;)
>> 
> See this thread for details:
> 
> https://www.mail-archive.com/gentoo-alt%40lists.gentoo.org/msg03694.html
> 
> Changing the tree to support case-insensitve file systems may not be 
> possible. AFAIK that the Prefix tree is really just the main Gentoo tree at 
> this point, and because the main tree originated on Linux it assumes case 
> sensitivity.
> 
> I run my prefix out of a case-insensitive sparse bundle and haven't seen the 
> problem.
> 
> John
> 

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