commit: 8812b7d491fd83c984db309dfcfa09e7f9506ebc Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun Mar 16 12:59:28 2014 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Sat Mar 22 09:44:40 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=8812b7d4
sci-biology/conifer: new package Package-Manager: portage-2.2.7 --- sci-biology/conifer/ChangeLog | 9 +++++++++ sci-biology/conifer/conifer-0.2.2.ebuild | 25 +++++++++++++++++++++++++ sci-biology/conifer/metadata.xml | 9 +++++++++ 3 files changed, 43 insertions(+) diff --git a/sci-biology/conifer/ChangeLog b/sci-biology/conifer/ChangeLog new file mode 100644 index 0000000..bfb4794 --- /dev/null +++ b/sci-biology/conifer/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/conifer +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*conifer-0.2.2 (16 Mar 2014) + + 16 Mar 2014; Martin Mokrejs <[email protected]> + +conifer-0.2.2.ebuild, +metadata.xml: + sci-biology/conifer: new package diff --git a/sci-biology/conifer/conifer-0.2.2.ebuild b/sci-biology/conifer/conifer-0.2.2.ebuild new file mode 100644 index 0000000..8b012df --- /dev/null +++ b/sci-biology/conifer/conifer-0.2.2.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +PYTHON_COMPAT=( python{2_6,2_7} ) + +DESCRIPTION="Copy Number Inference/Variants (CNV) from exome reads" +HOMEPAGE="http://conifer.sf.net"; +SRC_URI="http://downloads.sourceforge.net/project/conifer/CoNIFER%200.2.2/conifer_v0.2.2.tar.gz"; + +LICENSE="GPL-3+" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/"${PN}"_v"${PV}" + +src_install(){ + dobin *.py +} diff --git a/sci-biology/conifer/metadata.xml b/sci-biology/conifer/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/conifer/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
