commit: e26cb1509794089cfcaf22cbead79430ad10cbcc Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun Mar 23 18:25:19 2014 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sun Mar 23 18:25:19 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e26cb150
sci-biology/VarScan: a new package with some classes and no INSTALL docs, needs help from java team for sure --- sci-biology/VarScan/VarScan-2.3.6.ebuild | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/sci-biology/VarScan/VarScan-2.3.6.ebuild b/sci-biology/VarScan/VarScan-2.3.6.ebuild new file mode 100644 index 0000000..1051f71 --- /dev/null +++ b/sci-biology/VarScan/VarScan-2.3.6.ebuild @@ -0,0 +1,22 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit java-pkg-2 + +DESCRIPTION="Variant detection (germline, multi-sample, somatic mutations, somatic copy number alterations (CNA)), SNP calls" +HOMEPAGE="http://varscan.sourceforge.net/"; +SRC_URI="http://downloads.sourceforge.net/project/varscan/VarScan.v2.3.6.jar"; + +LICENSE="Non-profit-OSL-3.0" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND=" + >=virtual/jdk-1.5 + dev-java/ant-core" +RDEPEND="${DEPEND} + >=virtual/jre-1.5"
