commit: b8a9f4f57b25ab54ae7403885b58664f87cba750 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun Mar 23 18:37:37 2014 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sun Mar 23 18:37:37 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=b8a9f4f5
sci-biology/MagicViewer: a skeleton for a new package, needs help from java team for sure --- sci-biology/MagicViewer/MagicViewer-1.2.1.ebuild | 25 ++++++++++++++++++++++++ sci-biology/MagicViewer/metadata.xml | 9 +++++++++ 2 files changed, 34 insertions(+) diff --git a/sci-biology/MagicViewer/MagicViewer-1.2.1.ebuild b/sci-biology/MagicViewer/MagicViewer-1.2.1.ebuild new file mode 100644 index 0000000..4342d0f --- /dev/null +++ b/sci-biology/MagicViewer/MagicViewer-1.2.1.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=3 + +inherit java-pkg-2 java-ant-2 eutils + +DESCRIPTION="Display short reads alignment, identify the genetic variation and associate with reference annotation" +HOMEPAGE="http://bioinformatics.zj.cn/magicviewer"; +SRC_URI="http://59.79.168.90/soft/MagicViewer_1.2.1_x86_64_linux.tar.gz + http://59.79.168.90/soft/MagicViewer_1.2.1_x86_32_linux.tar.gz"; + +LICENSE="" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND=">=virtual/jdk-1.6" +RDEPEND="${DEPEND} + >=virtual/jre-1.6" + +# TODO: install either contents from +# MagicViewer_1.2.1_x86_32_linux/ subdir or MagicViewer_1.2.1_x86_64_linux/ + diff --git a/sci-biology/MagicViewer/metadata.xml b/sci-biology/MagicViewer/metadata.xml new file mode 100644 index 0000000..07b5255 --- /dev/null +++ b/sci-biology/MagicViewer/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
