commit: 17d1701d267f7c6beb268b4dd661f042ec4b4f0b Author: Horea Christian <h.chr <AT> mail <DOT> ru> AuthorDate: Tue Apr 7 11:09:05 2015 +0000 Commit: Francois Bissey <f.r.bissey <AT> massey <DOT> ac <DOT> nz> CommitDate: Tue Apr 7 11:09:05 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=17d1701d
removed ebuilds with unavailable sources Package-Manager: portage-2.2.18 sci-biology/fsl/ChangeLog | 3 + sci-biology/fsl/fsl-5.0.4.ebuild | 115 --------------------------------------- sci-biology/fsl/fsl-5.0.5.ebuild | 115 --------------------------------------- 3 files changed, 3 insertions(+), 230 deletions(-) diff --git a/sci-biology/fsl/ChangeLog b/sci-biology/fsl/ChangeLog index 48835a1..e509710 100644 --- a/sci-biology/fsl/ChangeLog +++ b/sci-biology/fsl/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 07 Apr 2015; <[email protected]> -fsl-5.0.4.ebuild, -fsl-5.0.5.ebuild: + removed ebuilds with unavailable sources + 07 Apr 2015; <[email protected]> fsl-5.0.6.ebuild: added new gentoo fsl-5.0.6 source location diff --git a/sci-biology/fsl/fsl-5.0.4.ebuild b/sci-biology/fsl/fsl-5.0.4.ebuild deleted file mode 100644 index b036faf..0000000 --- a/sci-biology/fsl/fsl-5.0.4.ebuild +++ /dev/null @@ -1,115 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=5 - -inherit eutils toolchain-funcs prefix - -DESCRIPTION="Analysis of functional, structural, and diffusion MRI brain imaging data" -HOMEPAGE="http://www.fmrib.ox.ac.uk/fsl"; -SRC_URI="http://fsl.fmrib.ox.ac.uk/fsldownloads/${P}-sources.tar.gz"; - -LICENSE="FSL BSD-2 newmat" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -COMMON_DEPEND="media-libs/glu - media-libs/libpng - media-libs/gd - sys-libs/zlib - dev-libs/boost - " -DEPEND="${COMMON_DEPEND}" -RDEPEND="${COMMON_DEPEND} - dev-lang/tcl - dev-lang/tk - " - -S=${WORKDIR}/${PN} - -src_prepare(){ - epatch "${FILESDIR}/${P}"-setup.patch - epatch "${FILESDIR}/${P}"-headers.patch - epatch "${FILESDIR}/${P}"-fsldir_redux.patch - - sed -i \ - -e "s:@@GENTOO_RANLIB@@:$(tc-getRANLIB):" \ - -e "s:@@GENTOO_CC@@:$(tc-getCC):" \ - -e "s:@@GENTOO_CXX@@:$(tc-getCXX):" \ - config/generic/systemvars.mk || die - - eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX src/*) \ - etc/js/label-div.html - - makefilelist=$(find src/ -name Makefile) - - sed -i \ - -e "s:-I\${INC_BOOST}::" \ - -e "s:-I\${INC_ZLIB}::" \ - -e "s:-I\${INC_GD}::" \ - -e "s:-I\${INC_PNG}::" \ - -e "s:-L\${LIB_GD}::" \ - -e "s:-L\${LIB_PNG}::" \ - -e "s:-L\${LIB_ZLIB}::" \ - ${makefilelist} || die - - sed -i "s:\${FSLDIR}/bin/::g" \ - $(grep -rl "\${FSLDIR}/bin" src/*) \ - $(grep -rl "\${FSLDIR}/bin" etc/matlab/*) - sed -i "s:\$FSLDIR/bin/::g" \ - $(grep -rl "\$FSLDIR/bin" src/*) \ - $(grep -rl "\$FSLDIR/bin" etc/matlab/*) - - sed -i "s:\$FSLDIR/data:${EPREFIX}/usr/share/fsl/data:g" \ - $(grep -rl "\$FSLDIR/data" src/*) - - sed -i "s:\${FSLDIR}/data:${EPREFIX}/usr/share/fsl/data:g" \ - $(grep -rl "\${FSLDIR}/data" src/*) - - sed -i "s:\$FSLDIR/etc:${EPREFIX}/etc:g" \ - $(grep -rl "\$FSLDIR/etc" src/*) - - sed -i "s:\${FSLDIR}/etc:${EPREFIX}/etc:g" \ - $(grep -rl "\${FSLDIR}/etc" src/*) - - sed -i "s:\$FSLDIR/doc:${EPREFIX}/usr/share/fsl/doc:g" \ - $(grep -rl "\$FSLDIR/doc" src/*) - - sed -i "s:\${FSLDIR}/doc:${EPREFIX}/usr/share/fsl/doc:g" \ - $(grep -rl "\${FSLDIR}/doc" src/*) - - sed -i "s:\'\${FSLDIR}\'/doc:${EPREFIX}/usr/share/fsl/doc:g" \ - $(grep -rl "\'\${FSLDIR}\'/doc" src/*) -} - -src_compile() { - export FSLDIR=${WORKDIR}/${PN} - export FSLCONDIR=${WORKDIR}/${PN}/config - export FSLMACHTYPE=generic - - export USERLDFLAGS="${LDFLAGS}" - export USERCFLAGS="${CFLAGS}" - export USERCXXFLAGS="${CXXFLAGS}" - - ./build || die -} - -src_install() { - doexe bin/* - - insinto /usr/share/${PN} - doins -r doc data refdoc - - insinto /usr/libexec/fsl - doins -r tcl - - insinto /etc - doins -r etc/default_flobs.flobs etc/flirtsch etc/js etc/luts - #if use matlab; then - # doins etc/matlab - #fi - - doenvd "${FILESDIR}"/99fsl -} diff --git a/sci-biology/fsl/fsl-5.0.5.ebuild b/sci-biology/fsl/fsl-5.0.5.ebuild deleted file mode 100644 index 5b13e77..0000000 --- a/sci-biology/fsl/fsl-5.0.5.ebuild +++ /dev/null @@ -1,115 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=5 - -inherit eutils toolchain-funcs prefix - -DESCRIPTION="Analysis of functional, structural, and diffusion MRI brain imaging data" -HOMEPAGE="http://www.fmrib.ox.ac.uk/fsl"; -SRC_URI="http://fsl.fmrib.ox.ac.uk/fsldownloads/${P}-sources.tar.gz"; - -LICENSE="FSL BSD-2 newmat" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -COMMON_DEPEND="media-libs/glu - media-libs/libpng - media-libs/gd - sys-libs/zlib - dev-libs/boost - " -DEPEND="${COMMON_DEPEND}" -RDEPEND="${COMMON_DEPEND} - dev-lang/tcl - dev-lang/tk - " - -S=${WORKDIR}/${PN} - -src_prepare(){ - epatch "${FILESDIR}/${PN}"-5.0.4-setup.patch - epatch "${FILESDIR}/${PN}"-5.0.4-headers.patch - epatch "${FILESDIR}/${PN}"-5.0.4-fsldir_redux.patch - - sed -i \ - -e "s:@@GENTOO_RANLIB@@:$(tc-getRANLIB):" \ - -e "s:@@GENTOO_CC@@:$(tc-getCC):" \ - -e "s:@@GENTOO_CXX@@:$(tc-getCXX):" \ - config/generic/systemvars.mk || die - - eprefixify $(grep -rl GENTOO_PORTAGE_EPREFIX src/*) \ - etc/js/label-div.html - - makefilelist=$(find src/ -name Makefile) - - sed -i \ - -e "s:-I\${INC_BOOST}::" \ - -e "s:-I\${INC_ZLIB}::" \ - -e "s:-I\${INC_GD}::" \ - -e "s:-I\${INC_PNG}::" \ - -e "s:-L\${LIB_GD}::" \ - -e "s:-L\${LIB_PNG}::" \ - -e "s:-L\${LIB_ZLIB}::" \ - ${makefilelist} || die - - sed -i "s:\${FSLDIR}/bin/::g" \ - $(grep -rl "\${FSLDIR}/bin" src/*) \ - $(grep -rl "\${FSLDIR}/bin" etc/matlab/*) - sed -i "s:\$FSLDIR/bin/::g" \ - $(grep -rl "\$FSLDIR/bin" src/*) \ - $(grep -rl "\$FSLDIR/bin" etc/matlab/*) - - sed -i "s:\$FSLDIR/data:${EPREFIX}/usr/share/fsl/data:g" \ - $(grep -rl "\$FSLDIR/data" src/*) - - sed -i "s:\${FSLDIR}/data:${EPREFIX}/usr/share/fsl/data:g" \ - $(grep -rl "\${FSLDIR}/data" src/*) - - sed -i "s:\$FSLDIR/etc:${EPREFIX}/etc:g" \ - $(grep -rl "\$FSLDIR/etc" src/*) - - sed -i "s:\${FSLDIR}/etc:${EPREFIX}/etc:g" \ - $(grep -rl "\${FSLDIR}/etc" src/*) - - sed -i "s:\$FSLDIR/doc:${EPREFIX}/usr/share/fsl/doc:g" \ - $(grep -rl "\$FSLDIR/doc" src/*) - - sed -i "s:\${FSLDIR}/doc:${EPREFIX}/usr/share/fsl/doc:g" \ - $(grep -rl "\${FSLDIR}/doc" src/*) - - sed -i "s:\'\${FSLDIR}\'/doc:${EPREFIX}/usr/share/fsl/doc:g" \ - $(grep -rl "\'\${FSLDIR}\'/doc" src/*) -} - -src_compile() { - export FSLDIR=${WORKDIR}/${PN} - export FSLCONDIR=${WORKDIR}/${PN}/config - export FSLMACHTYPE=generic - - export USERLDFLAGS="${LDFLAGS}" - export USERCFLAGS="${CFLAGS}" - export USERCXXFLAGS="${CXXFLAGS}" - - ./build || die -} - -src_install() { - doexe bin/* - - insinto /usr/share/${PN} - doins -r doc data refdoc - - insinto /usr/libexec/fsl - doins -r tcl - - insinto /etc - doins -r etc/default_flobs.flobs etc/flirtsch etc/js etc/luts - #if use matlab; then - # doins etc/matlab - #fi - - doenvd "${FILESDIR}"/99fsl -}
