[gentoo-commits] proj/sci:master commit in: sci-biology/barrnap/

[Martin Mokrejs]

commit:     f3ff593d2e85576411873642f086c9e574431083
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Apr 27 10:57:24 2015 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Apr 27 10:57:24 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=f3ff593d

sci-biology/barrnap: version bump; adjust the ebuild to new install layout

Package-Manager: portage-2.2.18

 sci-biology/barrnap/ChangeLog                        |  6 ++++++
 sci-biology/barrnap/barrnap-0.3.ebuild               |  2 +-
 .../{barrnap-0.3.ebuild => barrnap-0.4.ebuild}       | 20 +++++++++++---------
 3 files changed, 18 insertions(+), 10 deletions(-)

diff --git a/sci-biology/barrnap/ChangeLog b/sci-biology/barrnap/ChangeLog
index 50bd6cd..05d6b32 100644
--- a/sci-biology/barrnap/ChangeLog
+++ b/sci-biology/barrnap/ChangeLog
@@ -2,6 +2,12 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*barrnap-0.4 (27 Apr 2015)
+
+  27 Apr 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> 
+barrnap-0.4.ebuild,
+  barrnap-0.3.ebuild:
+  sci-biology/barrnap: version bump; adjust the ebuild to new install layout
+
   07 Jan 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> barrnap-0.3.ebuild:
   generalized dependency on perl
 

diff --git a/sci-biology/barrnap/barrnap-0.3.ebuild 
b/sci-biology/barrnap/barrnap-0.3.ebuild
index 43d1a13..06d01c3 100644
--- a/sci-biology/barrnap/barrnap-0.3.ebuild
+++ b/sci-biology/barrnap/barrnap-0.3.ebuild
@@ -12,7 +12,7 @@ SRC_URI="http://www.vicbioinformatics.com/"${P}".tar.gz";
 
 LICENSE="GPL-3"
 SLOT="0"
-KEYWORDS=""
+KEYWORDS="~amd64"
 IUSE=""
 
 # contains bundled binaries of hmmer-3.1 (dev version)

diff --git a/sci-biology/barrnap/barrnap-0.3.ebuild 
b/sci-biology/barrnap/barrnap-0.4.ebuild
similarity index 64%
copy from sci-biology/barrnap/barrnap-0.3.ebuild
copy to sci-biology/barrnap/barrnap-0.4.ebuild
index 43d1a13..8855b27 100644
--- a/sci-biology/barrnap/barrnap-0.3.ebuild
+++ b/sci-biology/barrnap/barrnap-0.4.ebuild
@@ -12,7 +12,7 @@ SRC_URI="http://www.vicbioinformatics.com/"${P}".tar.gz";
 
 LICENSE="GPL-3"
 SLOT="0"
-KEYWORDS=""
+KEYWORDS="~amd64"
 IUSE=""
 
 # contains bundled binaries of hmmer-3.1 (dev version)
@@ -25,17 +25,19 @@ RDEPEND="${DEPEND}
 
 src_install(){
        # the below recreates the whole layout
-       insinto /usr/share/"${PN}"
-       doins barrnap
-       chmod a+rx "${D}"/usr/share/"${PN}"/barrnap
-       insinto /usr/share/"${PN}"/binaries
-       doins binaries/nhmmer.linux
-       chmod a+rx "${D}"/usr/share/"${PN}"/binaries/nhmmer.linux
+       insinto /usr/share/"${PN}"/bin
+       doins bin/barrnap
+       chmod a+rx "${D}"/usr/share/"${PN}"/bin/barrnap || die
+       insinto /usr/share/"${PN}"/binaries/linux
+       doins binaries/linux/nhmmer
+       chmod a+rx "${D}"/usr/share/"${PN}"/binaries/linux/nhmmer || die
        insinto /usr/share/"${PN}"/db
        doins db/*
-       insinto /usr/share/examples
+       insinto /usr/share/"${PN}"/examples
        doins examples/*
 
-       echo PATH=/usr/share/"${PN}":$PATH > "${S}"/99barrnap
+       echo PATH=/usr/share/"${PN}"/bin:$PATH > "${S}"/99barrnap
        doenvd "${S}"/99barrnap
+
+       dodoc README.md
 }