commit: 74bc48aaac3968150d9dbcc52877289811171493 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sat May 2 16:12:45 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sat May 2 16:12:45 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=74bc48aa
added PYTHON_USEDEP Package-Manager: portage-2.2.18 sci-biology/tophat/ChangeLog | 4 ++++ sci-biology/tophat/tophat-2.0.12.ebuild | 4 ++-- sci-biology/tophat/tophat-2.0.13.ebuild | 4 ++-- sci-biology/tophat/tophat-2.0.14.ebuild | 4 ++-- 4 files changed, 10 insertions(+), 6 deletions(-) diff --git a/sci-biology/tophat/ChangeLog b/sci-biology/tophat/ChangeLog index 62520a2..84e8313 100644 --- a/sci-biology/tophat/ChangeLog +++ b/sci-biology/tophat/ChangeLog @@ -2,6 +2,10 @@ # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/tophat/ChangeLog,v 1.14 2015/04/07 14:35:24 jlec Exp $ + 02 May 2015; Martin Mokrejs <[email protected]> + tophat-2.0.12.ebuild, tophat-2.0.13.ebuild, tophat-2.0.14.ebuild: + added PYTHON_USEDEP + 28 Apr 2015; Martin Mokrejs <[email protected]> tophat-2.0.12.ebuild, tophat-2.0.13.ebuild, tophat-2.0.14.ebuild: sci-biology/tophat: recorded depependencies; dropped KEYWORDS until we have diff --git a/sci-biology/tophat/tophat-2.0.12.ebuild b/sci-biology/tophat/tophat-2.0.12.ebuild index 13bb0f4..f818f1c 100644 --- a/sci-biology/tophat/tophat-2.0.12.ebuild +++ b/sci-biology/tophat/tophat-2.0.12.ebuild @@ -29,8 +29,8 @@ DEPEND="dev-libs/boost" # samtools_0.1.18 sort # samtools_0.1.18 merge -f -h -u -Q --sam-header RDEPEND="${DEPEND} - >=sci-biology/samtools-0.1.17 - <=sci-biology/samtools-0.1.19 + >=sci-biology/samtools-0.1.17[${PYTHON_USEDEP}] + <=sci-biology/samtools-0.1.19[${PYTHON_USEDEP}] >=sci-biology/bowtie-0.12.9 || ( >=sci-biology/bowtie-2.0.5 <=sci-biology/bowtie-2.2.3 )" # PATCHES=( "${FILESDIR}"/${P}-flags.patch ) diff --git a/sci-biology/tophat/tophat-2.0.13.ebuild b/sci-biology/tophat/tophat-2.0.13.ebuild index 6d4cdcb..c24d230 100644 --- a/sci-biology/tophat/tophat-2.0.13.ebuild +++ b/sci-biology/tophat/tophat-2.0.13.ebuild @@ -29,8 +29,8 @@ DEPEND="dev-libs/boost" # samtools_0.1.18 sort # samtools_0.1.18 merge -f -h -u -Q --sam-header RDEPEND="${DEPEND} - >=sci-biology/samtools-0.1.17 - <=sci-biology/samtools-0.1.19 + >=sci-biology/samtools-0.1.17[${PYTHON_USEDEP}] + <=sci-biology/samtools-0.1.19[${PYTHON_USEDEP}] >=sci-biology/bowtie-0.12.9 || ( >=sci-biology/bowtie-2.0.5 <=sci-biology/bowtie-2.2.3 )" # PATCHES=( "${FILESDIR}"/${P}-flags.patch ) diff --git a/sci-biology/tophat/tophat-2.0.14.ebuild b/sci-biology/tophat/tophat-2.0.14.ebuild index 2091866..579641f 100644 --- a/sci-biology/tophat/tophat-2.0.14.ebuild +++ b/sci-biology/tophat/tophat-2.0.14.ebuild @@ -29,8 +29,8 @@ DEPEND="dev-libs/boost" # samtools_0.1.18 sort # samtools_0.1.18 merge -f -h -u -Q --sam-header RDEPEND="${DEPEND} - >=sci-biology/samtools-0.1.17 - <=sci-biology/samtools-0.1.19 + >=sci-biology/samtools-0.1.17[${PYTHON_USEDEP}] + <=sci-biology/samtools-0.1.19[${PYTHON_USEDEP}] >=sci-biology/bowtie-0.12.9 || ( >=sci-biology/bowtie-2.0.5 <=sci-biology/bowtie-2.2.3 )" # see https://aur.archlinux.org/packages/tophat/ about linking issues
