commit: 206678a23fa5c9e15cac30b35b6951d6426551f5 Author: layman <layman <AT> localhost> AuthorDate: Thu May 21 17:40:24 2015 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Thu May 21 17:40:24 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=206678a2
sci-biology/kallisto: add kallisto Package-Manager: portage-2.2.14-prefix sci-biology/kallisto/ChangeLog | 10 ++++++++++ sci-biology/kallisto/kallisto-0.42.1.ebuild | 19 +++++++++++++++++++ sci-biology/kallisto/kallisto-9999.ebuild | 20 ++++++++++++++++++++ sci-biology/kallisto/metadata.xml | 9 +++++++++ 4 files changed, 58 insertions(+) diff --git a/sci-biology/kallisto/ChangeLog b/sci-biology/kallisto/ChangeLog new file mode 100644 index 0000000..6b15b36 --- /dev/null +++ b/sci-biology/kallisto/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/kallisto +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*kallisto-0.42.1 (21 May 2015) +*kallisto-9999 (21 May 2015) + + 21 May 2015; Michael Schubert <[email protected]> +kallisto-0.42.1.ebuild, + +kallisto-9999.ebuild, +metadata.xml: + sci-biology/kallisto: add kallisto diff --git a/sci-biology/kallisto/kallisto-0.42.1.ebuild b/sci-biology/kallisto/kallisto-0.42.1.ebuild new file mode 100644 index 0000000..dfc4eaf --- /dev/null +++ b/sci-biology/kallisto/kallisto-0.42.1.ebuild @@ -0,0 +1,19 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit cmake-utils + +DESCRIPTION="Near-optimal RNA-Seq quantification" +HOMEPAGE="http://pachterlab.github.io/kallisto/"; +SRC_URI="https://github.com/pachterlab/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +DEPEND="sci-libs/hdf5" +RDEPEND="${DEPEND}" diff --git a/sci-biology/kallisto/kallisto-9999.ebuild b/sci-biology/kallisto/kallisto-9999.ebuild new file mode 100644 index 0000000..cc5b269 --- /dev/null +++ b/sci-biology/kallisto/kallisto-9999.ebuild @@ -0,0 +1,20 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit git-r3 cmake-utils + +DESCRIPTION="Near-optimal RNA-Seq quantification" +HOMEPAGE="http://pachterlab.github.io/kallisto/"; +SRC_URI="" +EGIT_REPO_URI="https://github.com/pachterlab/kallisto.git"; + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +DEPEND="sci-libs/hdf5" +RDEPEND="${DEPEND}" diff --git a/sci-biology/kallisto/metadata.xml b/sci-biology/kallisto/metadata.xml new file mode 100644 index 0000000..b7551a6 --- /dev/null +++ b/sci-biology/kallisto/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Michael Schubert</name> + </maintainer> +</pkgmetadata>
