commit: baac64492c3678422d948c8b3fbd8a2ac66cabf8 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Mon May 25 21:16:30 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Mon May 25 21:16:30 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=baac6449
updated patch with a fixed target name glimmer_extract Package-Manager: portage-2.2.18 sci-biology/glimmer/ChangeLog | 4 ++++ sci-biology/glimmer/files/glimmer-3.02-rename_extract.patch | 11 +++++++++++ 2 files changed, 15 insertions(+) diff --git a/sci-biology/glimmer/ChangeLog b/sci-biology/glimmer/ChangeLog index 2871a0a..95afa54 100644 --- a/sci-biology/glimmer/ChangeLog +++ b/sci-biology/glimmer/ChangeLog @@ -3,6 +3,10 @@ # $Header: /var/cvsroot/gentoo-x86/sci-biology/glimmer/ChangeLog,v 1.10 2013/03/11 15:17:43 jlec Exp $ 25 May 2015; Martin Mokrejs <[email protected]> + files/glimmer-3.02-rename_extract.patch: + updated patch with a fixed target name glimmer_extract + + 25 May 2015; Martin Mokrejs <[email protected]> glimmer-3.02-r3.ebuild: EAPI bump diff --git a/sci-biology/glimmer/files/glimmer-3.02-rename_extract.patch b/sci-biology/glimmer/files/glimmer-3.02-rename_extract.patch index 07c8cd3..6eebc56 100644 --- a/sci-biology/glimmer/files/glimmer-3.02-rename_extract.patch +++ b/sci-biology/glimmer/files/glimmer-3.02-rename_extract.patch @@ -183,3 +183,14 @@ diff -r -u glimmer3.02.old/src/Util/extract.cc glimmer3.02/src/Util/extract.cc "\n" "Read fasta-format <sequence-file> and extract from it the\n" "subsequences specified by <coords>. By default, <coords>\n" +--- glimmer3.02.old/src/Util/Makefile 2015-05-25 22:43:12.760341653 +0200 ++++ glimmer-3.02-r3/work/glimmer3.02/src/Util/Makefile 2015-05-25 23:13:34.230372010 +0200 +@@ -21,7 +21,7 @@ + + entropy-score: entropy-score.o libGLMcommon.a + +-extract: extract.o libGLMcommon.a ++glimmer_extract: extract.o libGLMcommon.a + + multi-extract: multi-extract.o libGLMcommon.a +
