jlec 15/06/21 09:12:29 Modified: embassy-phylipnew-3.69.650_fix-build-system.patch Log: Update buildsystem for latest plplot, bug #552492 (Portage version: 2.2.20/cvs/Linux x86_64, signed Manifest commit with key E9402A79B03529A2!)
Revision Changes Path 1.2 sci-biology/embassy-phylipnew/files/embassy-phylipnew-3.69.650_fix-build-system.patch file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/embassy-phylipnew/files/embassy-phylipnew-3.69.650_fix-build-system.patch?rev=1.2&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/embassy-phylipnew/files/embassy-phylipnew-3.69.650_fix-build-system.patch?rev=1.2&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/embassy-phylipnew/files/embassy-phylipnew-3.69.650_fix-build-system.patch?r1=1.1&r2=1.2 Index: embassy-phylipnew-3.69.650_fix-build-system.patch =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/files/embassy-phylipnew-3.69.650_fix-build-system.patch,v retrieving revision 1.1 retrieving revision 1.2 diff -u -r1.1 -r1.2 --- embassy-phylipnew-3.69.650_fix-build-system.patch 28 Mar 2015 17:13:14 -0000 1.1 +++ embassy-phylipnew-3.69.650_fix-build-system.patch 21 Jun 2015 09:12:29 -0000 1.2 @@ -1,6 +1,13 @@ ---- PHYLIPNEW-3.69.650/configure.ac -+++ PHYLIPNEW-3.69.650/configure.ac -@@ -635,33 +635,6 @@ + configure.ac | 49 +++++++------------------------------------------ + emboss_acd/Makefile.am | 2 +- + src/Makefile.am | 7 ++----- + 3 files changed, 10 insertions(+), 48 deletions(-) + +diff --git a/configure.ac b/configure.ac +index e5bfaf1..09ed517 100644 +--- a/configure.ac ++++ b/configure.ac +@@ -635,33 +635,6 @@ AS_CASE([${host_os}], @@ -34,7 +41,7 @@ dnl FIXME: This does no longer seem required with Autoconf 2.67? dnl Intel MacOSX 10.6 puts X11 in a non-standard place dnl AS_IF([test "x${with_x}" != "xno"], -@@ -781,21 +754,6 @@ +@@ -781,21 +754,6 @@ AX_LIB_POSTGRESQL @@ -56,21 +63,34 @@ dnl Test if --enable-localforce given locallink="no" embprefix="/usr/local" -@@ -918,6 +876,11 @@ +@@ -918,6 +876,13 @@ AC_ARG_ENABLE([systemlibs], AM_CONDITIONAL([ESYSTEMLIBS], [test "x${enable_systemlibs}" = "xyes"]) +AS_IF([test "x${enable_systemlibs}" = "xyes"], +[ +dnl using system libraries -+ PKG_CHECK_MODULES([PLPLOT], [plplotd]) ++ PKG_CHECK_MODULES([PLPLOT], [plplotd], ++ [],[PKG_CHECK_MODULES([PLPLOT], [plplot])] ++ ) +]) # Enable the purify tool: --enable-purify, sets CC and LIBTOOL ---- PHYLIPNEW-3.69.650/src/Makefile.am -+++ PHYLIPNEW-3.69.650/src/Makefile.am -@@ -16,10 +16,7 @@ +diff --git a/emboss_acd/Makefile.am b/emboss_acd/Makefile.am +index e1c1878..e253c95 100644 +--- a/emboss_acd/Makefile.am ++++ b/emboss_acd/Makefile.am +@@ -1,3 +1,3 @@ + +-pkgdata_DATA = *.acd ++pkgdata_DATA = $(srcdir)/*.acd + pkgdatadir=$(prefix)/share/EMBOSS/acd +diff --git a/src/Makefile.am b/src/Makefile.am +index 1883ce9..fb1787f 100644 +--- a/src/Makefile.am ++++ b/src/Makefile.am +@@ -16,10 +16,7 @@ AM_CPPFLAGS = -I../include -I../../../nucleus -I../../../ajax/pcre \ -I../../../ajax/ensembl -I../../../ajax/ajaxdb \ -I../../../ajax/acd -I../../../plplot else @@ -82,17 +102,10 @@ endif if ISSHARED -@@ -120,5 +117,5 @@ +@@ -120,5 +117,5 @@ LDADD = ../../../nucleus/libnucleus.la ../../../ajax/acd/libacd.la \ ../../../plplot/libeplplot.la $(XLIB) else LDADD = -L${embprefix}/lib -lnucleus -lacd -lajaxdb -lensembl -lajaxg \ - -lajax -lepcre $(NLADD) -leplplot $(XLIB) + -lajax $(NLADD) $(XLIB) endif ---- PHYLIPNEW-3.69.650/emboss_acd/Makefile.am -+++ PHYLIPNEW-3.69.650/emboss_acd/Makefile.am -@@ -1,3 +1,3 @@ - --pkgdata_DATA = *.acd -+pkgdata_DATA = $(srcdir)/*.acd - pkgdatadir=$(prefix)/share/EMBOSS/acd
