jlec 15/07/27 18:42:15 Modified: ChangeLog Added: mothur-1.27.0-r1.ebuild Removed: mothur-1.13.0-r1.ebuild mothur-1.13.0-r2.ebuild mothur-1.27.0.ebuild Log: Use fortran-2.eclass, bug #543204; drop old (Portage version: 2.2.20/cvs/Linux x86_64, signed Manifest commit with key E9402A79B03529A2!)
Revision Changes Path 1.13 sci-biology/mothur/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mothur/ChangeLog?rev=1.13&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mothur/ChangeLog?rev=1.13&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mothur/ChangeLog?r1=1.12&r2=1.13 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/mothur/ChangeLog,v retrieving revision 1.12 retrieving revision 1.13 diff -u -r1.12 -r1.13 --- ChangeLog 7 Apr 2015 14:33:37 -0000 1.12 +++ ChangeLog 27 Jul 2015 18:42:15 -0000 1.13 @@ -1,6 +1,14 @@ # ChangeLog for sci-biology/mothur -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mothur/ChangeLog,v 1.12 2015/04/07 14:33:37 jlec Exp $ +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mothur/ChangeLog,v 1.13 2015/07/27 18:42:15 jlec Exp $ + +*mothur-1.27.0-r1 (27 Jul 2015) + + 27 Jul 2015; Justin Lecher <j...@gentoo.org> +mothur-1.27.0-r1.ebuild, + -files/mothur-1.13.0-makefile.patch, -files/mothur-1.13.0-overflows.patch, + -files/mothur-1.13.0-overflows2.patch, -mothur-1.13.0-r1.ebuild, + -mothur-1.13.0-r2.ebuild, -mothur-1.27.0.ebuild: + Use fortran-2.eclass, bug #543204; drop old 11 Mar 2013; Justin Lecher <j...@gentoo.org> metadata.xml: Drop Andrey as maintainer so that bugs get assigned to sci-biology directly @@ -61,4 +69,3 @@ 04 Mar 2009; Andrey Kislyuk <wea...@gentoo.org> ChangeLog: New package, ebuild written by me - 1.1 sci-biology/mothur/mothur-1.27.0-r1.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mothur/mothur-1.27.0-r1.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/mothur/mothur-1.27.0-r1.ebuild?rev=1.1&content-type=text/plain Index: mothur-1.27.0-r1.ebuild =================================================================== # Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/mothur/mothur-1.27.0-r1.ebuild,v 1.1 2015/07/27 18:42:15 jlec Exp $ EAPI=5 inherit eutils flag-o-matic fortran-2 toolchain-funcs DESCRIPTION="A suite of algorithms for ecological bioinformatics" HOMEPAGE="http://www.mothur.org/" SRC_URI="http://www.mothur.org/w/images/c/cb/Mothur.${PV}.zip -> ${P}.zip" LICENSE="GPL-3" SLOT="0" IUSE="mpi +readline" KEYWORDS="~amd64 ~x86" RDEPEND=" sci-biology/uchime mpi? ( virtual/mpi )" DEPEND="${RDEPEND} app-arch/unzip" S=${WORKDIR}/Mothur.source pkg_setup() { fortran-2_pkg_setup use mpi && export CXX=mpicxx || export CXX=$(tc-getCXX) use amd64 && append-cppflags -DBIT_VERSION } src_prepare() { epatch \ "${FILESDIR}"/${P}-makefile.patch \ "${FILESDIR}"/${P}-overflows.patch } src_compile() { emake USEMPI=$(usex mpi) USEREADLINE=$(usex readline) } src_install() { dobin ${PN} }