[gentoo-commits] proj/sci:master commit in: sci-biology/samtools/

[Justin Lecher]

commit:     3b78eff2b8046466746871467e132507bcf8d013
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Mon Sep 21 17:25:05 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Sep 21 17:25:05 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=3b78eff2

sci-biology/samtools: Add subslot operators

Package-Manager: portage-2.2.20.1
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/samtools/samtools-1.0-r2.ebuild | 8 ++++----
 sci-biology/samtools/samtools-1.1-r1.ebuild | 8 ++++----
 sci-biology/samtools/samtools-1.2-r1.ebuild | 8 ++++----
 3 files changed, 12 insertions(+), 12 deletions(-)

diff --git a/sci-biology/samtools/samtools-1.0-r2.ebuild 
b/sci-biology/samtools/samtools-1.0-r2.ebuild
index d81f815..b10e681 100644
--- a/sci-biology/samtools/samtools-1.0-r2.ebuild
+++ b/sci-biology/samtools/samtools-1.0-r2.ebuild
@@ -20,7 +20,7 @@ IUSE="examples"
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 CDEPEND="
-       sys-libs/ncurses
+       sys-libs/ncurses:0=
        sci-libs/htslib"
 
 RDEPEND="${CDEPEND}
@@ -34,15 +34,15 @@ src_prepare() {
 
        sed -i 's~/software/bin/python~/usr/bin/env python~' 
"${S}"/misc/varfilter.py || die
 
-       epatch "${FILESDIR}"/${P}-buildsystem.patch
-       epatch "${FILESDIR}"/${P}-rmdup.patch
+       epatch \
+               "${FILESDIR}"/${P}-buildsystem.patch \
+               "${FILESDIR}"/${P}-rmdup.patch
 
        tc-export CC AR
 
        sed \
                -e '/htslib.mk/d' \
                -i Makefile || die
-
 }
 
 src_compile() {

diff --git a/sci-biology/samtools/samtools-1.1-r1.ebuild 
b/sci-biology/samtools/samtools-1.1-r1.ebuild
index 0d65870..9941156 100644
--- a/sci-biology/samtools/samtools-1.1-r1.ebuild
+++ b/sci-biology/samtools/samtools-1.1-r1.ebuild
@@ -20,7 +20,7 @@ IUSE="examples"
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 CDEPEND="
-       sys-libs/ncurses
+       sys-libs/ncurses:0=
        ~sci-libs/htslib-${PV}"
 
 RDEPEND="${CDEPEND}
@@ -34,15 +34,15 @@ src_prepare() {
 
        sed -i 's~/software/bin/python~/usr/bin/env python~' 
"${S}"/misc/varfilter.py || die
 
-       epatch "${FILESDIR}"/${P}-buildsystem.patch
-       epatch "${FILESDIR}"/${P}-rmdup.patch
+       epatch \
+               "${FILESDIR}"/${P}-buildsystem.patch \
+               "${FILESDIR}"/${P}-rmdup.patch
 
        tc-export CC AR
 
        sed \
                -e '/htslib.mk/d' \
                -i Makefile || die
-
 }
 
 src_compile() {

diff --git a/sci-biology/samtools/samtools-1.2-r1.ebuild 
b/sci-biology/samtools/samtools-1.2-r1.ebuild
index 648032c..dcbd07b 100644
--- a/sci-biology/samtools/samtools-1.2-r1.ebuild
+++ b/sci-biology/samtools/samtools-1.2-r1.ebuild
@@ -20,7 +20,7 @@ IUSE="examples"
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 CDEPEND="
-       sys-libs/ncurses
+       sys-libs/ncurses:0=
        >=sci-libs/htslib-${PV}"
 
 RDEPEND="${CDEPEND}
@@ -34,15 +34,15 @@ src_prepare() {
 
        sed -i 's~/software/bin/python~/usr/bin/env python~' 
"${S}"/misc/varfilter.py || die
 
-       epatch "${FILESDIR}"/${P}-buildsystem.patch
-       epatch "${FILESDIR}"/${P}-rmdup.patch
+       epatch \
+               "${FILESDIR}"/${P}-buildsystem.patch \
+               "${FILESDIR}"/${P}-rmdup.patch
 
        tc-export CC AR
 
        sed \
                -e '/htslib.mk/d' \
                -i Makefile || die
-
 }
 
 src_compile() {