commit: 1ee22ba11c2bd964ef4270f4f31733b4b22254a2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Thu Jun 23 16:26:08 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Thu Jun 23 16:26:08 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=1ee22ba1
sci-biology/jannovar-bin: drop KEYWORDS as the launchers point to non-existing jar files Package-Manager: portage-2.2.28 sci-biology/jannovar-bin/jannovar-bin-0.16.ebuild | 19 ++++++++++++------- 1 file changed, 12 insertions(+), 7 deletions(-) diff --git a/sci-biology/jannovar-bin/jannovar-bin-0.16.ebuild b/sci-biology/jannovar-bin/jannovar-bin-0.16.ebuild index fc706b8..aee7faa 100644 --- a/sci-biology/jannovar-bin/jannovar-bin-0.16.ebuild +++ b/sci-biology/jannovar-bin/jannovar-bin-0.16.ebuild @@ -9,20 +9,25 @@ inherit java-pkg-2 DESCRIPTION="Exome annotation tool" HOMEPAGE="http://compbio.charite.de https://github.com/charite/jannovar"; -SRC_URI="https://github.com/charite/jannovar/releases/download/v0.16/jannovar-cli-0.16.jar"; +SRC_URI="https://github.com/charite/jannovar/releases/download/v${PV}/jannovar-cli-${PV}.jar + https://repo1.maven.org/maven2/de/charite/compbio/jped-cli/${PV}/jped-cli-${PV}.jar"; LICENSE="BSD-2" SLOT="0" -KEYWORDS="~amd64" +KEYWORDS="" IUSE="" -DEPEND=">=virtual/jdk-1.7" -RDEPEND=">=virtual/jre-1.7" +DEPEND=">=virtual/jdk-1.6" +RDEPEND=">=virtual/jre-1.6" S="${WORKDIR}" +# BUG: the two jar file soverwrite each other somehow during install src_install(){ - cp "${DISTDIR}"/jannovar-cli-0.16.jar jannovar-bin.jar - java-pkg_newjar jannovar-bin.jar - java-pkg_dolauncher jannovar-bin --jar jannovar-bin.jar + cp "${DISTDIR}"/jannovar-cli-"${PV}".jar jannovar-cli-bin.jar + java-pkg_newjar jannovar-cli-bin.jar + java-pkg_dolauncher jannovar-bin --jar jannovar-cli-"${PV}".jar + cp "${DISTDIR}"/jped-cli-"${PV}".jar jped-cli-bin.jar + java-pkg_newjar jped-cli-bin.jar + java-pkg_dolauncher jped-cli-bin --jar jped-cli-"${PV}".jar }
