[gentoo-commits] proj/sci:master commit in: dev-java/htsjdk/

[Martin Mokrejs]

commit:     091fd4549ad2edd83419e0f645cc902a2f71ae23
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Jul 12 15:53:53 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Jul 12 15:53:53 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=091fd454

dev-java/htsjdk: version bump, moved from ant to gradle, SANDBOX VIOLATION

Package-Manager: portage-2.2.28

 dev-java/htsjdk/{htsjdk-2.2.2.ebuild => htsjdk-2.5.1.ebuild} | 9 ++++++---
 1 file changed, 6 insertions(+), 3 deletions(-)

diff --git a/dev-java/htsjdk/htsjdk-2.2.2.ebuild 
b/dev-java/htsjdk/htsjdk-2.5.1.ebuild
similarity index 89%
rename from dev-java/htsjdk/htsjdk-2.2.2.ebuild
rename to dev-java/htsjdk/htsjdk-2.5.1.ebuild
index ca2cdd9..b63c0d2 100644
--- a/dev-java/htsjdk/htsjdk-2.2.2.ebuild
+++ b/dev-java/htsjdk/htsjdk-2.5.1.ebuild
@@ -15,7 +15,7 @@ 
SRC_URI="https://github.com/samtools/htsjdk/archive/${PV}.tar.gz -> ${P}.tar.gz"
 LICENSE="MIT"
 SLOT="0"
 IUSE=""
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="" # SANDBOX VIOLATION
 
 CDEPEND="dev-java/commons-jexl:2
        dev-java/commons-compress:0
@@ -31,9 +31,12 @@ EANT_NEEDS_TOOLS="true"
 JAVA_ANT_REWRITE_CLASSPATH="true"
 EANT_GENTOO_CLASSPATH="commons-jexl-2,commons-compress,commons-logging"
 
-java_prepare() {
+java_prepare(){
        default
-       rm -v lib/{commons-compress,commons-jexl,commons-logging}*.jar || die
+}
+
+src_compile(){
+       ./gradlew build || die
 }
 
 src_install() {