commit: 72d56ebd894309c383e7a1f54b0c13dce2be6d7d Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Fri Jul 29 09:20:54 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Fri Jul 29 09:20:54 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=72d56ebd
sci-biology/twinscan: do not install test.pl, keep track of file collision Package-Manager: portage-2.3.0 sci-biology/twinscan/twinscan-4.1.2-r1.ebuild | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild b/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild index 469ac63..a4c3258 100644 --- a/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild +++ b/sci-biology/twinscan/twinscan-4.1.2-r1.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2015 Gentoo Foundation +# Copyright 1999-2016 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ @@ -7,7 +7,7 @@ EAPI=5 PERL_EXPORT_PHASE_FUNCTIONS=no inherit perl-module eutils toolchain-funcs -DESCRIPTION="iscan (aka twinscan and N-SCAN) and wrapper around Pairagon: A gene structure prediction pipeline" +DESCRIPTION="iscan (aka twinscan and N-SCAN), Pairagon wrapper: Gene structure pred. pipeline" HOMEPAGE="http://mblab.wustl.edu/software/twinscan"; SRC_URI="http://mblab.wustl.edu/software/download/iscan-${PV}.tar_.gz -> ${P}.tar.gz" @@ -39,6 +39,9 @@ src_prepare() { } src_install() { + # TODO: prevent file collision with media-gfx/iscan by renaming iscan to iscan_twinscan + # also fix a Genscan++ToZoe.pl Nscan_driver.pl runTwinscan2.pl run_iscan.pl run_iscan_cons.pl run_iscan_cons_list.pl test.pl + rm bin/test.pl || die dobin bin/iscan bin/zoe2gtf bin/*.pl src/*.pl dolib lib/libzoe.a insinto /usr/share/${PN}
