commit: 0f0dfd5089d75186aff4f1e557eabedfcf0930e8
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Jul 29 20:44:32 2016 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Jul 29 20:44:32 2016 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=0f0dfd50
dev-perl/Bio-DB-HTS: new package, needs more fixes
Package-Manager: portage-2.3.0
dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.3.ebuild | 28 ++++++++++++++++++++++++++++
dev-perl/Bio-DB-HTS/metadata.xml | 12 ++++++++++++
2 files changed, 40 insertions(+)
diff --git a/dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.3.ebuild
b/dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.3.ebuild
new file mode 100644
index 0000000..d450118
--- /dev/null
+++ b/dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.3.ebuild
@@ -0,0 +1,28 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+MODULE_AUTHOR="RISHIDEV"
+inherit perl-module multilib toolchain-funcs
+
+DESCRIPTION="Enable rapid access to bgzipped FASTA files"
+
+#LICENSE="|| ( Artistic GPL-1 GPL-2 GPL-3 )"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+RDEPEND=""
+DEPEND="${RDEPEND}
+ dev-perl/Module-Build
+ sci-libs/htslib"
+
+SRC_TEST="do"
+
+src_prepare(){
+ # https://github.com/Ensembl/Bio-HTS/issues/15
+ # https://github.com/Ensembl/Bio-HTS/issues/30
+ HTSLIB_LIBDIR="${EPREFIX}"/"$(get_libdir)"
HTSLIB_INCDIR="/usr/include/htslib" perl-module_src_prepare
+}
diff --git a/dev-perl/Bio-DB-HTS/metadata.xml b/dev-perl/Bio-DB-HTS/metadata.xml
new file mode 100644
index 0000000..f68a1b6
--- /dev/null
+++ b/dev-perl/Bio-DB-HTS/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
+<pkgmetadata>
+ <maintainer type="person">
+ <email>[email protected]</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>[email protected]</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
