commit: 29d62487d6b5776402688fee78b2dbb47cdf3e5c Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Mon Aug 1 12:43:59 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Mon Aug 1 12:43:59 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=29d62487
sci-biology/SnpEff: re-order dependencies, back to EAPI=5 Package-Manager: portage-2.3.0 sci-biology/SnpEff/SnpEff-4.2.ebuild | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/sci-biology/SnpEff/SnpEff-4.2.ebuild b/sci-biology/SnpEff/SnpEff-4.2.ebuild index 9272b63..7cdd51c 100644 --- a/sci-biology/SnpEff/SnpEff-4.2.ebuild +++ b/sci-biology/SnpEff/SnpEff-4.2.ebuild @@ -2,7 +2,7 @@ # Distributed under the terms of the GNU General Public License v2 # $Id$ -EAPI=6 +EAPI=5 inherit java-pkg-2 java-ant-2 @@ -18,12 +18,13 @@ KEYWORDS="~amd64" IUSE="" # https://github.com/pcingola/SnpEff/blob/master/README_release.txt -DEPEND=" +RDEPEND=" >=virtual/jre-1.7:* dev-java/maven-bin:* dev-java/antlr:*" -RDEPEND="${DEPEND} - >=virtual/jdk-1.7:*" +DEPEND="${RDEPEND} + >=virtual/jdk-1.7:* + dev-java/ant-core" S="${WORKDIR}" @@ -36,7 +37,7 @@ src_install(){ mkdir -p "${D}"/usr/share || die # but portage does not install the .* files and subdirs, grr! unzip \ - "${DISTDIR}"/snpEff_v4_1e_core.zip -d "${D}"/usr/share \ + "${DISTDIR}"/snpEff_v4_2_core.zip -d "${D}"/usr/share \ || die "failed to unzip ${DISTDIR}/snpEff_v4_2_core.zip" sed \ -e 's#$HOME/tools/picard/#/usr/share/picard/lib/#' \
