[gentoo-commits] proj/sci:master commit in: sci-biology/ensembl-tools/

[Martin Mokrejs]

commit:     51323d9c686f7a9bd5ec8b04d003353f8829e520
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Aug  1 12:43:09 2016 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Aug  1 12:43:09 2016 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=51323d9c

sci-biology/ensembl-tools: add more dependencies

Package-Manager: portage-2.3.0

 sci-biology/ensembl-tools/ensembl-tools-85.ebuild | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/sci-biology/ensembl-tools/ensembl-tools-85.ebuild 
b/sci-biology/ensembl-tools/ensembl-tools-85.ebuild
index 0ed40bb..ffa1b63 100644
--- a/sci-biology/ensembl-tools/ensembl-tools-85.ebuild
+++ b/sci-biology/ensembl-tools/ensembl-tools-85.ebuild
@@ -17,7 +17,8 @@ SLOT="0"
 KEYWORDS="" # BUG: needs Bio::EnsEMBL::Registry
 IUSE=""
 
-DEPEND=""
+DEPEND="dev-perl/File-Copy-Recursive
+       dev-perl/Archive-Extract"
 #DEPEND="dev-perl/Perl-XS
 #      dev-perl/Bio-DB-HTS"
 RDEPEND="${DEPEND}"
@@ -28,7 +29,8 @@ src_install(){
        perl_set_version
        insinto ${VENDOR_LIB}/${PN}
        cd scripts/variant_effect_predictor || die
-       perl INSTALL.pl --DESTDIR="${EPREFIX}"/"${DESTDIR}" --AUTO ac
+       # FIXME: INSTALL.pl does not exit upon error
+       ./INSTALL.pl --DESTDIR="${DESTDIR}"/"${EPREFIX}" --AUTO=ac || die
        newdoc README.txt variant_effect_predictor.txt
        cd ../../scripts/region_reporter || die
        dobin *.pl